Index

G

gillespie_algorithm_criterion() (cmmlinflam.StemGillespie method) (cmmlinflam.StemGillespieTIMEVAR method) gillespie_algorithm_fixation() (cmmlinflam.StemGillespie method) (cmmlinflam.StemGillespieTIMEVAR method)

gillespie_algorithm_fixed_times() (cmmlinflam.StemGillespie method) (cmmlinflam.StemGillespieTIMEVAR method)

N

n_outputs() (cmmlinflam.StemGillespie method)

n_parameters() (cmmlinflam.StemGillespie method)

O

one_step_gillespie() (cmmlinflam.StemGillespie method) (cmmlinflam.StemGillespieTIMEVAR method)

one_step_wf() (cmmlinflam.StemWF method) (cmmlinflam.StemWFTIMEVAR method) output_names() (cmmlinflam.StemGillespie method)

P

parameter_names() (cmmlinflam.StemGillespie method)

S

set_outputs() (cmmlinflam.StemGillespie method) simulate_criterion() (cmmlinflam.StemGillespie method) (cmmlinflam.StemGillespieTIMEVAR method) (cmmlinflam.StemWF method) (cmmlinflam.StemWFTIMEVAR method) simulate_fixation() (cmmlinflam.StemGillespie method) (cmmlinflam.StemGillespieTIMEVAR method) (cmmlinflam.StemWF method) (cmmlinflam.StemWFTIMEVAR method)

simulate_fixed_times() (cmmlinflam.StemGillespie method) (cmmlinflam.StemGillespieTIMEVAR method) (cmmlinflam.StemWF method) (cmmlinflam.StemWFTIMEVAR method) StemGillespie (class in cmmlinflam) StemGillespieTIMEVAR (class in cmmlinflam) StemWF (class in cmmlinflam) StemWFTIMEVAR (class in cmmlinflam)

W

wf_algorithm_criterion() (cmmlinflam.StemWF method) (cmmlinflam.StemWFTIMEVAR method) wf_algorithm_fixation() (cmmlinflam.StemWF method) (cmmlinflam.StemWFTIMEVAR method)

wf_algorithm_fixed_times() (cmmlinflam.StemWF method) (cmmlinflam.StemWFTIMEVAR method)